An Application-Directed, Versatile DNA FISH Platform for Research and Diagnostics

Methods Mol Biol. 2018;1766:303-333. doi: 10.1007/978-1-4939-7768-0_17. PMID: 29605860.

Genome-Wide Profiling of DNA Double-Strand Breaks by the BLESS and BLISS Methods.

Methods Mol Biol. 2018;1672:167-194. doi: 10.1007/978-1-4939-7306-4_14.


Synthetic lethality between androgen receptor signalling and the PARP pathway in prostate cancer.

Nat Commun. 2017 Aug 29;8(1):374. doi: 10.1038/s41467-017-00393-y.

Nanogrid single-nucleus RNA sequencing reveals phenotypic diversity in breast cancer.

Nat Commun. 2017 Aug 9;8(1):228. doi: 10.1038/s41467-017-00244-w.

Engineered Cpf1 variants with altered PAM specificities.

Nat Biotechnol 2017 Jun 5. doi: 10.1038/nbt.3900

A damaged genome’s transcriptional landscape through multilayered expression profiling around in situ-mapped DNA double-strand breaks.

Nat Commun 2017 May 31;8:15656. doi: 10.1038/ncomms15656

BLISS is a versatile and quantitative method for genome-wide profiling of DNA double-strand breaks.

Nat Commun 2017 May doi: 10.1038/ncomms15058

Ssb1 and Ssb2 cooperate to regulate mouse hematopoietic stem and progenitor cells by resolving replicative stress.

Blood 2017 Mar doi: 10.1182/blood-2016-06-725093


Massive and parallel expression profiling using microarrayed single-cell sequencing.

Nat Commun. 2016 Oct 14;7:13182. doi: 10.1038/ncomms13182

Single-cell 5hmC sequencing reveals chromosome-wide cell-to-cell variability and enables lineage reconstruction.

Nat Biotechnol. 2016 Jun 27. doi: 10.1038/nbt.3598

Combined inhibition of DDR1 and Notch signaling is a therapeutic strategy for KRAS-driven lung adenocarcinoma.

Nat Med. 2016 Mar;22(3):270-7. doi: 10.1038/nm.4041


Genome-wide maps of nuclear lamina interactions in single human cells.

Cell. 2015 Sep 24;163(1):134-47. doi: 10.1016/j.cell.2015.08.040

Integrated genome and transcriptome sequencing of the same cell.

Nat Biotechnol. 2015 Mar;33(3):285-9. doi: 10.1038/nbt.3129

Spatially resolved transcriptomics and beyond.

Nat Rev Genet. 2015 Jan;16(1):57-66. doi: 10.1038/nrg3832

For our previous publications go to:

Nicola’s publication


Magda’s publications